Hello!
I am having issues running the example model (or compile any model) after a new install of rstan and associated dependencies. I have run through the github tutorial several times, receive the desired output, and am able to install jsonlite from source.
However, when I run the example() code, I constantly receive the follow error:
Compilation ERROR, function(s)/method(s) not created!
Error in compileCode(f, code, language = language, verbose = verbose) :
C:\rtools42\x86_64-w64-mingw32.static.posix\bin/ld.exe: file4f7c1fcb5494.o:file4f7c1fcb5494.cpp:(.text$_ZN3tbb8internal26task_scheduler_observer_v3D0Ev[_ZN3tbb8internal26task_scheduler_observer_v3D0Ev]+0x1d): undefined reference to tbb::internal::task_scheduler_observer_v3::observe(bool)'C:\rtools42\x86_64-w64-mingw32.static.posix\bin/ld.exe: file4f7c1fcb5494.o:file4f7c1fcb5494.cpp:(.text$_ZN3tbb10interface623task_scheduler_observerD1Ev[_ZN3tbb10interface623task_scheduler_observerD1Ev]+0x1d): undefined reference to tbb::internal::task_scheduler_observer_v3::observe(bool)'C:\rtools42\x86_64-w64-mingw32.static.posix\bin/ld.exe: file4f7c1fcb5494.o:file4f7c1fcb5494.cpp:(.text$_ZN3tbb10interface623task_scheduler_observerD1Ev[_ZN3tbb10interface623task_scheduler_observerD1Ev]+0x3a): undefined reference to `tbb::internal::task_scheduler_observer_v3::observe(bool)'C:\rtools42\x86_64-w64-mingw32.static.posix\bin/ld.exe: file4f7c1fcb5494.o:file4f7c1fcb5494.cpp:(.text$_ZN3tbb10interface
Any suggestions or advice?
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Operating System: 12th Gen Intel(R) Core™ i9-12900HK 2.50 GHz w/ 32gbs RAM
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RStan Version: 2.21.5
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Output of
writeLines(readLines(file.path(Sys.getenv("HOME"), ".R/Makevars"))):
Error in file(con, “r”) : cannot open the connection
In addition: Warning message:
In file(con, “r”) :
cannot open file ‘C:/Users/chris/OneDrive/Documents/.R/Makevars’: No such file or directory -
Output of
devtools::session_info("rstan")
─ Session info ────────────────────────────────────────────────────────────────────────────
setting value
version R version 4.2.0 (2022-04-22 ucrt)
os Windows 10 x64 (build 22000)
system x86_64, mingw32
ui RStudio
language (EN)
collate English_United States.utf8
ctype English_United States.utf8
tz America/Los_Angeles
date 2022-05-21
rstudio 2022.02.2+485 Prairie Trillium (desktop)
pandoc NA
─ Packages ────────────────────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
backports 1.4.1 2021-12-13 [1] CRAN (R 4.2.0)
BH 1.78.0-0 2021-12-15 [1] CRAN (R 4.2.0)
callr 3.7.0 2021-04-20 [1] CRAN (R 4.2.0)
checkmate 2.1.0 2022-04-21 [1] CRAN (R 4.2.0)
cli 3.3.0 2022-04-25 [1] CRAN (R 4.2.0)
colorspace 2.0-3 2022-02-21 [1] CRAN (R 4.2.0)
crayon 1.5.1 2022-03-26 [1] CRAN (R 4.2.0)
desc 1.4.1 2022-03-06 [1] CRAN (R 4.2.0)
digest 0.6.29 2021-12-01 [1] CRAN (R 4.2.0)
ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.2.0)
fansi 1.0.3 2022-03-24 [1] CRAN (R 4.2.0)
farver 2.1.0 2021-02-28 [1] CRAN (R 4.2.0)
ggplot2 3.3.6 2022-05-03 [1] CRAN (R 4.2.0)
glue 1.6.2 2022-02-24 [1] CRAN (R 4.2.0)
gridExtra 2.3 2017-09-09 [1] CRAN (R 4.2.0)
gtable 0.3.0 2019-03-25 [1] CRAN (R 4.2.0)
inline 0.3.19 2021-05-31 [1] CRAN (R 4.2.0)
isoband 0.2.5 2021-07-13 [1] CRAN (R 4.2.0)
labeling 0.4.2 2020-10-20 [1] CRAN (R 4.2.0)
lattice 0.20-45 2021-09-22 [2] CRAN (R 4.2.0)
lifecycle 1.0.1 2021-09-24 [1] CRAN (R 4.2.0)
loo 2.5.1 2022-03-24 [1] CRAN (R 4.2.0)
magrittr 2.0.3 2022-03-30 [1] CRAN (R 4.2.0)
MASS 7.3-56 2022-03-23 [2] CRAN (R 4.2.0)
Matrix 1.4-1 2022-03-23 [2] CRAN (R 4.2.0)
matrixStats 0.62.0 2022-04-19 [1] CRAN (R 4.2.0)
mgcv 1.8-40 2022-03-29 [2] CRAN (R 4.2.0)
munsell 0.5.0 2018-06-12 [1] CRAN (R 4.2.0)
nlme 3.1-157 2022-03-25 [2] CRAN (R 4.2.0)
pillar 1.7.0 2022-02-01 [1] CRAN (R 4.2.0)
pkgbuild 1.3.1 2021-12-20 [1] CRAN (R 4.2.0)
pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.2.0)
prettyunits 1.1.1 2020-01-24 [1] CRAN (R 4.2.0)
processx 3.5.3 2022-03-25 [1] CRAN (R 4.2.0)
ps 1.7.0 2022-04-23 [1] CRAN (R 4.2.0)
R6 2.5.1 2021-08-19 [1] CRAN (R 4.2.0)
RColorBrewer 1.1-3 2022-04-03 [1] CRAN (R 4.2.0)
Rcpp 1.0.8.3 2022-03-17 [1] CRAN (R 4.2.0)
RcppEigen 0.3.3.9.2 2022-04-08 [1] CRAN (R 4.2.0)
RcppParallel 5.1.5 2022-01-05 [1] CRAN (R 4.2.0)
rlang 1.0.2 2022-03-04 [1] CRAN (R 4.2.0)
rprojroot 2.0.3 2022-04-02 [1] CRAN (R 4.2.0)
rstan 2.21.5 2022-04-11 [1] CRAN (R 4.2.0)
scales 1.2.0 2022-04-13 [1] CRAN (R 4.2.0)
StanHeaders 2.21.0-7 2020-12-17 [1] CRAN (R 4.2.0)
tibble 3.1.7 2022-05-03 [1] CRAN (R 4.2.0)
utf8 1.2.2 2021-07-24 [1] CRAN (R 4.2.0)
vctrs 0.4.1 2022-04-13 [1] CRAN (R 4.2.0)
viridisLite 0.4.0 2021-04-13 [1] CRAN (R 4.2.0)
withr 2.5.0 2022-03-03 [1] CRAN (R 4.2.0)
[1] C:/Users/chris/AppData/Local/R/win-library/4.2
[2] C:/Program Files/R/R-4.2.0/library