I’m giving a quick tutorial on estimating ODEs in Stan. It’s quick (1 hour + 30 minutes of questions). It’s free.
This will be a hands-on tutorial using Stan!
- how an ordinary differential equation (ODE) works within a statistical model
- how to specify it in Stan
- how to estimate the ODE parameters from Stan
- actually fit some data!
Please come with either: R and CmdStanR, Python and CmdStanPy, or CmdStan installed. If you’re not familiar with any, please install R and CmdStanR. I’ll provide magic invocations so you can follow along.