I am writing functions to work with location scale models in brms
.
What is the best way to identify the link used for the scale parameter, sigma
?
If ls.me
was a location scale mixed effect model fit in brms
, I thought the family
element may have info, but although it shows the two parameters, mu
and sigma
the identity link is just for mu
. The summary()
does show that the link for sigma is a log link, but I dug around awhile in the brmsfit
model object without success.
ls.me <- brm(bf(
y ~ 1 + x + (1 + x | ID),
sigma ~ 1 + x + (1 + x | ID)),
family = "gaussian",
data = d, seed = 1234,
silent = 2, refresh = 0,
chains = 4L, cores = 4L, backend = "cmdstanr")
> str(ls.me$family)
List of 11
$ family : chr "gaussian"
$ link : chr "identity"
$ linkfun :function (mu)
$ linkinv :function (eta)
$ dpars : chr [1:2] "mu" "sigma"
$ type : chr "real"
$ ybounds : num [1:2] -Inf Inf
$ closed : logi [1:2] NA NA
$ ad : chr [1:7] "weights" "subset" "se" "cens" ...
$ normalized: chr [1:5] "_time_hom" "_time_het" "_lagsar" "_errorsar" ...
$ specials : chr [1:2] "residuals" "rescor"
- attr(*, "class")= chr [1:2] "brmsfamily" "family"
Thanks for any tips or suggestions!