I was having trouble understanding what was going on in lme4, NONMEM, Monolix, etc., and so I did what any grad student would do and wrote up a tutorial.
Please let me know if you have questions; especially if you have corrections.
It’s not really a Stan tutorial per se because Stan doesn’t yet implement any of these algorithms. So I’m not sure what I’ll do with it, if anything.
mcem.pdf (202.3 KB)
P.S. This is just the knitr
tutfte::tufte_handout format, which produces pdfs—the
tufte_html produces HTML, but I couldn’t include it here in Discourse.