I had a model that was working, but then I added a generated quantities block and new data so I could get predictions. When I did this I got the error
failed to create the sampler; sampling not done
There was no other information provided, making this problem difficult to debug.
-
Operating System - Linux
-
RStan Version - 2.17.3
-
Output of
writeLines(readLines(file.path(Sys.getenv("HOME"), ".R/Makevars")))
CXXFLAGS=-O3 -mtune=native -march=native -Wno-unused-variable -Wno-unused-function -Wno-macro-redefined
CXXFLAGS += -Wno-ignored-attributes -Wno-deprecated-declarations
-
Output of
devtools::session_info("rstan")
setting value
version R version 3.5.1 (2018-07-02)
system x86_64, linux-gnu
ui RStudio (1.1.447)
language (EN)
collate en_US.UTF-8
tz America/New_York
date 2018-07-08package * version date
assertthat 0.2.0 2017-04-11
BH 1.66.0-1 2018-02-13
cli 1.0.0 2017-11-05
colorspace 1.3-2 2016-12-14
crayon 1.3.4 2017-09-16
dichromat 2.0-0 2013-01-24
digest 0.6.15 2018-01-28
ggplot2 * 2.2.1.9000 2018-06-30
glue 1.2.0 2017-10-29
graphics * 3.5.1 2018-07-02
grDevices * 3.5.1 2018-07-02
grid 3.5.1 2018-07-02
gridExtra 2.3 2017-09-09
gtable 0.2.0 2016-02-26
inline 0.3.14 2015-04-13
labeling 0.3 2014-08-23
lattice 0.20-35 2017-03-25
lazyeval 0.2.1 2017-10-29
magrittr 1.5 2014-11-22
MASS 7.3-50 2018-04-30
Matrix 1.2-14 2018-04-13
methods * 3.5.1 2018-07-02
mgcv 1.8-24 2018-06-23
munsell 0.4.3 2016-02-13
nlme 3.1-137 2018-04-07
pillar 1.2.3 2018-05-25
plyr 1.8.4 2016-06-08
R6 2.2.2 2017-06-17
RColorBrewer 1.1-2 2014-12-07
Rcpp 0.12.17 2018-05-18
RcppEigen 0.3.3.4.0 2018-02-07
reshape2 1.4.3 2017-12-11
rlang 0.2.1 2018-05-30
rstan * 2.17.3 2018-01-20
scales 0.5.0 2017-08-24
StanHeaders * 2.17.2 2018-01-20
stats * 3.5.1 2018-07-02
stats4 3.5.1 2018-07-02
stringi 1.2.3 2018-06-12
stringr * 1.3.1 2018-05-10
tibble * 1.4.2 2018-01-22
tools 3.5.1 2018-07-02
utf8 1.1.4 2018-05-24
utils * 3.5.1 2018-07-02
viridisLite 0.3.0 2018-02-01
withr 2.1.2 2018-03-15
source
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
Github (tidyverse/ggplot2@348b26f)
CRAN (R 3.5.0)
local
local
local
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.1)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.1)
CRAN (R 3.5.1)
local
CRAN (R 3.5.1)
CRAN (R 3.5.0)
CRAN (R 3.5.1)
cran (@1.2.3)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
cran (@0.12.17)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
cran (@0.2.1)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
CRAN (R 3.5.0)
local
local
cran (@1.2.3)
cran (@1.3.1)
CRAN (R 3.5.0)
local
cran (@1.1.4)
local
CRAN (R 3.5.0)
CRAN (R 3.5.0)