Hi all,
I’m trying to change the color of the density plot. Here is my code
<<echo=FALSE,message=FALSE>>=
library(egg)
library(gridExtra)
stanplot <- stan_plot(myfit, pars=c("alpha","beta1","sigma"))
stantrace <- stan_trace(myfit,inc_warmup=FALSE, pars=c("alpha","beta1","sigma"))
standens <- stan_dens(myfit, pars=c("alpha","beta1","sigma"))
standens2 <- standens + ggplot2::scale_color_manual(values = c("black"))
stanac <- stan_ac(myfit, pars=c("alpha","beta1","sigma"))
stanac <- stanac + theme(axis.title.y=element_blank())
ggarrange(plots=list(stantrace,standens2,stanac),nrow=3,
widths = list(unit(5,'in'), unit(5, 'in')),
labels=c('Trace Plot','Density Plot','Autocorrelation Plot'))
@
Nothing is changing and I’m still getting that beautiful read stan color. No error messages either.
Thanks
David