I updated Mac OS to Sonoma 14.0. I have M1 arm. RStan stopped working. So I deleted R RStudio, installed XCode anew. Installed R, RStudio, Rstan. It all works, except compilation. For example, rstanarm works, so Stan works. However it doesn’t compile. By trying to get a basic Stan model to compil…

Can't compile code using RStan

compiler

Ara_Winter November 14, 2023, 12:51am 4

We have a threads in a few places that might help

Unable to install cmdstanr on Mac ventura M1 MacBook Air Other

In RStudio: > install.packages("cmdstanr", repos = c("https://mc-stan.org/r-packages/", getOption("repos"))) Installing package into ‘/Users/andy/Library/R/arm64/4.2/library’ (as ‘lib’ is unspecified) also installing the dependencies ‘ps’, ‘data.table’, ‘processx’ Warning in install.packages : unable to access index for repository https://mc-stan.org/r-packages/bin/macosx/big-sur-arm64/contrib/4.2: cannot open URL 'https://mc-stan.org/r-packages/bin/macosx/big-sur-arm64/contrib/4.2/PACKAGE…

Rstan on Apple M2 chip Interfaces

Has anyone had any success getting Rstan working on the new M2 chip. Running Ventura on a new M2 MacBook Air. example(stan_model, package = "rstan", run.dontrun = TRUE) Gets me this: Compilation ERROR, function(s)/method(s) not created! Error in compileCode(f, code, language = language, verbose = verbose) : typedef double local_scalar_t__; ^36 warnings generated.error: unknown target CPU 'apple-a12'note: valid target CPU values are: i386, i486, winchip-c6, win…

Rstan on Apple M2 chip Interfaces

Has anyone had any success getting Rstan working on the new M2 chip. Running Ventura on a new M2 MacBook Air. example(stan_model, package = "rstan", run.dontrun = TRUE) Gets me this: Compilation ERROR, function(s)/method(s) not created! Error in compileCode(f, code, language = language, verbose = verbose) : typedef double local_scalar_t__; ^36 warnings generated.error: unknown target CPU 'apple-a12'note: valid target CPU values are: i386, i486, winchip-c6, win…

Compile issue with Rstan on Macbook Pro M1 RStan

Thanks @Ara_Winter, I will look into this, but unfortunately, so far it looks like most of the libraries like gfortran are for Mac OS 13 and not 14, so there might be a version issue. For security reasons, I will probably not be allowed to downgrade. I will repeat the steps in the linked thread again and see if I have any luck.

Running brm doesnt work on mac but runs on windows brms

Hi all, I am new to brm() and wanted to use it to run a model for my analyses. I do get the following error-message as I call brm(): Divergences: Stan model ‘anon_model’ does not contain samples. Error in do.call(rbind, sampler_params) : second argument must be a list I m running the code on an M2 chip and sonoma as operating system. I installed the scode CLI and gfortran using the macrtools package. I then installed the required packages from source. My model runs on a windows system using…

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Topic		Replies	Views
Compile issue with Rstan on Macbook Pro M1 RStan rstan , installation , compiler	16	1823	November 22, 2023
Cannot compile codes using rstan RStan rstan , brms	0	340	December 21, 2023
Can't compile a simple C file with Rstan on MacOS Sonoma 14.5 Developers rstan , bug	3	635	July 15, 2024
Compilation error on Mac RStan rstan	21	5412	July 9, 2019
Problem compiling Stan code RStan rstan	1	1050	November 27, 2018

Can't compile code using RStan

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