cp bin/linux-stanc bin/stanc /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -std=c++1y -pthread -D_REENTRANT -Wno-sign-compare -Wno-ignored-attributes -I stan/lib/stan_math/lib/opencl_2.2.0 -I stan/lib/stan_math/lib/tbb_2019_U8/include -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.72.0 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -DBOOST_DISABLE_ASSERTS -DSTAN_OPENCL -DOPENCL_DEVICE_ID=0 -DOPENCL_PLATFORM_ID=0 -DCL_HPP_TARGET_OPENCL_VERSION=120 -DCL_HPP_MINIMUM_OPENCL_VERSION=120 -DCL_HPP_ENABLE_EXCEPTIONS -Wno-ignored-attributes -c -fvisibility=hidden -o bin/cmdstan/stansummary.o src/cmdstan/stansummary.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -std=c++1y -pthread -D_REENTRANT -Wno-sign-compare -Wno-ignored-attributes -I stan/lib/stan_math/lib/opencl_2.2.0 -I stan/lib/stan_math/lib/tbb_2019_U8/include -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.72.0 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -DBOOST_DISABLE_ASSERTS -DSTAN_OPENCL -DOPENCL_DEVICE_ID=0 -DOPENCL_PLATFORM_ID=0 -DCL_HPP_TARGET_OPENCL_VERSION=120 -DCL_HPP_MINIMUM_OPENCL_VERSION=120 -DCL_HPP_ENABLE_EXCEPTIONS -Wno-ignored-attributes -c -fvisibility=hidden -o bin/cmdstan/print.o src/cmdstan/print.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -std=c++1y -pthread -D_REENTRANT -Wno-sign-compare -Wno-ignored-attributes -I stan/lib/stan_math/lib/opencl_2.2.0 -I stan/lib/stan_math/lib/tbb_2019_U8/include -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.72.0 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -DBOOST_DISABLE_ASSERTS -DSTAN_OPENCL -DOPENCL_DEVICE_ID=0 -DOPENCL_PLATFORM_ID=0 -DCL_HPP_TARGET_OPENCL_VERSION=120 -DCL_HPP_MINIMUM_OPENCL_VERSION=120 -DCL_HPP_ENABLE_EXCEPTIONS -Wno-ignored-attributes -c -fvisibility=hidden -o bin/cmdstan/diagnose.o src/cmdstan/diagnose.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/nvector/serial/nvector_serial.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/nvector/serial/nvector_serial.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_math.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_math.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_io.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_io.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_diag.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_diag.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodea.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodea.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_direct.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_direct.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodea_io.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodea_io.o chmod +x bin/stanc /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_stg.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_stg.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_bbdpre.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_bandpre.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_bandpre.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_spils.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_spils.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_ls.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_ls.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_sim.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_sim.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_stg1.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_stg1.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_matrix.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_matrix.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_futils.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_futils.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_direct.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_direct.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nonlinearsolver.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nonlinearsolver.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_version.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_version.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_band.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_band.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_iterative.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_iterative.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_linearsolver.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_linearsolver.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_memory.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_memory.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector_senswrapper.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector_senswrapper.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_dense.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_dense.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/band/sunmatrix_band.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/band/sunmatrix_band.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/dense/sunmatrix_dense.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/dense/sunmatrix_dense.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/band/sunlinsol_band.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/band/sunlinsol_band.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/dense/sunlinsol_dense.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/dense/sunlinsol_dense.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/newton/sunnonlinsol_newton.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_spils.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_spils.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_ic.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_ic.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idaa_io.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idaa_io.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_direct.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_direct.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls_stg.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls_stg.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_bbdpre.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_io.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_io.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idaa.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idaa.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_ls.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_ls.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls_sim.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls_sim.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_bbdpre.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_bbdpre.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_direct.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_direct.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_ls.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_ls.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_spils.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_spils.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -pipe -pthread -D_REENTRANT -O3 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNO_FPRINTF_OUTPUT -O3 -c -x c -include stan/lib/stan_math/lib/sundials_5.6.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_io.c -o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_io.o touch stan/lib/stan_math/lib/tbb/tbb-make-check --- Compiling the main object file. This might take up to a minute. --- /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -std=c++1y -pthread -D_REENTRANT -Wno-sign-compare -Wno-ignored-attributes -I stan/lib/stan_math/lib/opencl_2.2.0 -I stan/lib/stan_math/lib/tbb_2019_U8/include -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.72.0 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -DBOOST_DISABLE_ASSERTS -DSTAN_OPENCL -DOPENCL_DEVICE_ID=0 -DOPENCL_PLATFORM_ID=0 -DCL_HPP_TARGET_OPENCL_VERSION=120 -DCL_HPP_MINIMUM_OPENCL_VERSION=120 -DCL_HPP_ENABLE_EXCEPTIONS -Wno-ignored-attributes -c -o src/cmdstan/main_opencl.o src/cmdstan/main.cpp --- Compiling pre-compiled header. This might take a few seconds. --- /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -std=c++1y -pthread -D_REENTRANT -Wno-sign-compare -Wno-ignored-attributes -I stan/lib/stan_math/lib/opencl_2.2.0 -I stan/lib/stan_math/lib/tbb_2019_U8/include -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.72.0 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -DBOOST_DISABLE_ASSERTS -DSTAN_OPENCL -DOPENCL_DEVICE_ID=0 -DOPENCL_PLATFORM_ID=0 -DCL_HPP_TARGET_OPENCL_VERSION=120 -DCL_HPP_MINIMUM_OPENCL_VERSION=120 -DCL_HPP_ENABLE_EXCEPTIONS -Wno-ignored-attributes -c stan/src/stan/model/model_header.hpp -o stan/src/stan/model/model_header_opencl.hpp.gch /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar -rs stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_5.6.1/src/nvector/serial/nvector_serial.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_math.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar: creating stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_nvecserial.a tbb_root="../tbb_2019_U8" CXX="/home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++" CC="/home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-gcc" LDFLAGS='-Wl,-L,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" ' 'make' -C "stan/lib/stan_math/lib/tbb" -r -f "/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb_2019_U8/build/Makefile.tbbmalloc" compiler=/home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-gcc cfg=release stdver=c++1y malloc CXXFLAGS="-Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation " make[1]: Entering directory '/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb' /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I../tbb_2019_U8/src/tbbmalloc -I../tbb_2019_U8/src/tbbmalloc ../tbb_2019_U8/src/tbbmalloc/backend.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I../tbb_2019_U8/src/tbbmalloc -I../tbb_2019_U8/src/tbbmalloc ../tbb_2019_U8/src/tbbmalloc/large_objects.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I../tbb_2019_U8/src/tbbmalloc -I../tbb_2019_U8/src/tbbmalloc ../tbb_2019_U8/src/tbbmalloc/backref.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I../tbb_2019_U8/src/tbbmalloc -I../tbb_2019_U8/src/tbbmalloc ../tbb_2019_U8/src/tbbmalloc/tbbmalloc.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -o itt_notify_malloc.o -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/itt_notify.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar -rs stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_kinsol.a stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_direct.o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_bbdpre.o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol.o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_ls.o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_spils.o stan/lib/stan_math/lib/sundials_5.6.1/src/kinsol/kinsol_io.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar: creating stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_kinsol.a /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar -rs stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_io.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_diag.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodea.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_direct.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodea_io.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_stg.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_bbdpre.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_bandpre.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_spils.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_ls.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_sim.o stan/lib/stan_math/lib/sundials_5.6.1/src/cvodes/cvodes_nls_stg1.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar: creating stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_cvodes.a sh ../tbb_2019_U8/build/version_info_linux.sh /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -Wextra -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include >version_string.ver echo "INPUT (libtbbmalloc.so.2)" > libtbbmalloc.so /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -E -x c++ ../tbb_2019_U8/src/tbbmalloc/lin64-tbbmalloc-export.def -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -Wextra -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-parentheses -Wno-sized-deallocation -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include > tbbmalloc.def /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -Wextra -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -D__TBBMALLOC_BUILD=1 -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I../tbb_2019_U8/src/tbbmalloc -I../tbb_2019_U8/src/tbbmalloc ../tbb_2019_U8/src/tbbmalloc/proxy.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -Wextra -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -D__TBBMALLOC_BUILD=1 -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I../tbb_2019_U8/src/tbbmalloc -I../tbb_2019_U8/src/tbbmalloc ../tbb_2019_U8/src/tbbmalloc/tbb_function_replacement.cpp echo "INPUT (libtbbmalloc_proxy.so.2)" > libtbbmalloc_proxy.so /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -E -x c++ ../tbb_2019_U8/src/tbbmalloc/lin64-proxy-export.def -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wall -Wextra -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -Wno-parentheses -Wno-sized-deallocation -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include > tbbmallocproxy.def /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-parentheses -Wno-sized-deallocation -fPIC -flifetime-dse=1 -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I../tbb_2019_U8/src/tbbmalloc -I../tbb_2019_U8/src/tbbmalloc -I. ../tbb_2019_U8/src/tbbmalloc/frontend.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar -rs stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_spils.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_ic.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idaa_io.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_direct.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls_stg.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_bbdpre.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_io.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idaa.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_ls.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls.o stan/lib/stan_math/lib/sundials_5.6.1/src/idas/idas_nls_sim.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_5.6.1/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_5.6.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-ar: creating stan/lib/stan_math/lib/sundials_5.6.1/lib/libsundials_idas.a /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-gcc -fPIC -o libtbbmalloc.so.2 backend.o large_objects.o backref.o tbbmalloc.o itt_notify_malloc.o frontend.o -ldl -lpthread -lrt -shared -Wl,-soname=libtbbmalloc.so.2 -m64 -Wl,-L,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,--version-script,tbbmalloc.def /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fPIC -o libtbbmalloc_proxy.so.2 proxy.o tbb_function_replacement.o -ldl -lpthread -lrt libtbbmalloc.so -shared -Wl,-soname=libtbbmalloc_proxy.so.2 -m64 -Wl,-L,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,--version-script,tbbmallocproxy.def make[1]: Leaving directory '/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb' touch stan/lib/stan_math/lib/tbb/version_tbb_2019_U8 tbb_root="../tbb_2019_U8" CXX="/home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++" CC="/home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-gcc" LDFLAGS='-Wl,-L,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" ' 'make' -C "stan/lib/stan_math/lib/tbb" -r -f "/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb_2019_U8/build/Makefile.tbb" compiler=/home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-gcc cfg=release stdver=c++1y CXXFLAGS="-Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation " make[1]: Entering directory '/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb' /home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb_2019_U8/build/Makefile.tbb:28: CONFIG: cfg=release arch=intel64 compiler=/home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-gcc target=linux runtime=cc9.3.0_libc2.31_kernel5.8.0 /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o concurrent_hash_map.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/concurrent_hash_map.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o concurrent_queue.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/concurrent_queue.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o concurrent_vector.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/concurrent_vector.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o dynamic_link.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/dynamic_link.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o itt_notify.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/itt_notify.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o cache_aligned_allocator.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/cache_aligned_allocator.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o pipeline.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/pipeline.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o queuing_mutex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/queuing_mutex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o queuing_rw_mutex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/queuing_rw_mutex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o reader_writer_lock.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/reader_writer_lock.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o spin_rw_mutex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/spin_rw_mutex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o x86_rtm_rw_mutex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/x86_rtm_rw_mutex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o spin_mutex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/spin_mutex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o critical_section.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/critical_section.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o mutex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/mutex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o recursive_mutex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/recursive_mutex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o condition_variable.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/condition_variable.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o tbb_thread.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/tbb_thread.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o concurrent_monitor.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/concurrent_monitor.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o semaphore.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/semaphore.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o private_server.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/private_server.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o rml_tbb.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/rml/client/rml_tbb.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o tbb_misc.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include -I. ../tbb_2019_U8/src/tbb/tbb_misc.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o tbb_misc_ex.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/tbb_misc_ex.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o task.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/task.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o task_group_context.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/task_group_context.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o governor.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/governor.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o market.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/market.cpp In file included from stan/lib/stan_math/stan/math/opencl/prim.hpp:86, from stan/lib/stan_math/stan/math/prim.hpp:7, from stan/src/stan/io/dump.hpp:7, from src/cmdstan/command.hpp:24, from src/cmdstan/main.cpp:1: stan/lib/stan_math/stan/math/opencl/scalar_type.hpp:14:8: error: partial specialization of 'struct stan::scalar_type >::value, void>::type>' after instantiation of 'struct stan::scalar_type, void>' [-fpermissive] 14 | struct scalar_type> { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o arena.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/arena.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o scheduler.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/scheduler.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o observer_proxy.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/observer_proxy.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o tbb_statistics.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/tbb_statistics.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o tbb_main.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/tbb/tbb_main.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o concurrent_vector_v2.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/old/concurrent_vector_v2.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o concurrent_queue_v2.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/old/concurrent_queue_v2.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o spin_rw_mutex_v2.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/old/spin_rw_mutex_v2.cpp /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -o task_v2.o -c -MMD -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -std=c++1y -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include ../tbb_2019_U8/src/old/task_v2.cpp sh ../tbb_2019_U8/build/generate_tbbvars.sh echo "INPUT (libtbb.so.2)" > libtbb.so /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -E -x c++ ../tbb_2019_U8/src/tbb/lin64-tbb-export.def -DDO_ITT_NOTIFY -O2 -DUSE_PTHREAD -m64 -mrtm -fPIC -flifetime-dse=1 -D__TBB_BUILD=1 -Wall -Wextra -Wno-parentheses -Wno-sized-deallocation -Wno-unknown-warning-option -Wno-missing-attributes -Wno-class-memaccess -Wno-sized-deallocation -I../tbb_2019_U8/src -I../tbb_2019_U8/src/rml/include -I../tbb_2019_U8/include > tbb.def /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fPIC -o libtbb.so.2 concurrent_hash_map.o concurrent_queue.o concurrent_vector.o dynamic_link.o itt_notify.o cache_aligned_allocator.o pipeline.o queuing_mutex.o queuing_rw_mutex.o reader_writer_lock.o spin_rw_mutex.o x86_rtm_rw_mutex.o spin_mutex.o critical_section.o mutex.o recursive_mutex.o condition_variable.o tbb_thread.o concurrent_monitor.o semaphore.o private_server.o rml_tbb.o tbb_misc.o tbb_misc_ex.o task.o task_group_context.o governor.o market.o arena.o scheduler.o observer_proxy.o tbb_statistics.o tbb_main.o concurrent_vector_v2.o concurrent_queue_v2.o spin_rw_mutex_v2.o task_v2.o -ldl -lpthread -lrt -shared -Wl,-soname=libtbb.so.2 -m64 -Wl,-L,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,--version-script,tbb.def make[1]: Leaving directory '/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb' /home/gz2294/anaconda3/envs/cmdstanr/bin/x86_64-conda-linux-gnu-g++ -fvisibility-inlines-hidden -std=c++17 -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -std=c++1y -pthread -D_REENTRANT -Wno-sign-compare -Wno-ignored-attributes -I stan/lib/stan_math/lib/opencl_2.2.0 -I stan/lib/stan_math/lib/tbb_2019_U8/include -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.72.0 -I stan/lib/stan_math/lib/sundials_5.6.1/include -DNDEBUG -D_FORTIFY_SOURCE=2 -O2 -isystem /home/gz2294/anaconda3/envs/rstan-gpu/include -DBOOST_DISABLE_ASSERTS -DSTAN_OPENCL -DOPENCL_DEVICE_ID=0 -DOPENCL_PLATFORM_ID=0 -DCL_HPP_TARGET_OPENCL_VERSION=120 -DCL_HPP_MINIMUM_OPENCL_VERSION=120 -DCL_HPP_ENABLE_EXCEPTIONS -Wno-ignored-attributes -Wl,-O2 -Wl,--sort-common -Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags -Wl,--gc-sections -Wl,-rpath,/home/gz2294/anaconda3/envs/rstan-gpu/lib -Wl,-rpath-link,/home/gz2294/anaconda3/envs/rstan-gpu/lib -L/home/gz2294/anaconda3/envs/rstan-gpu/lib -Wl,-L,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/home/gz2294/.cmdstan/cmdstan-2.26.1/stan/lib/stan_math/lib/tbb" bin/cmdstan/diagnose.o -lOpenCL -o bin/diagnose /home/gz2294/anaconda3/envs/cmdstanr/bin/../lib/gcc/x86_64-conda-linux-gnu/9.3.0/../../../../x86_64-conda-linux-gnu/bin/ld: cannot find -lOpenCL collect2: error: ld returned 1 exit status make: *** [make/command:13: bin/diagnose] Error 1 make: *** Waiting for unfinished jobs.... make: *** [make/program:14: src/cmdstan/main_opencl.o] Error 1